tldr-pages/tldr

Page request: snakemake

Open

#12,366 opened on Feb 25, 2024

View on GitHub
 (1 comment) (0 reactions) (0 assignees)Shell (2,507 forks)batch import
help wantednew command

Repository metrics

Stars
 (30,937 stars)
PR merge metrics
 (Avg merge 7d 5h) (321 merged PRs in 30d)

Description

Command description

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language.

Command details

No response

Documentation

https://snakemake.readthedocs.io/en/stable/

Platform

Common

VCS repository link (e.g. GitHub, GitLab)

https://github.com/snakemake/snakemake

Additional information

Much used in bioinformatics, 2k Github stars

Contributor guide

Research direction
Review existing tldr page format and Snakemake documentation to create a concise cheatsheet.
Tech stack
python
Domain
documentation
Issue type
Documentation
DifficultyEstimated implementation difficulty for a new contributor, from 1 for very small changes to 5 for expert-level work.
1
Estimated timeA rough time range for an experienced contributor to investigate, implement, test, and prepare a pull request.
Under 1 hour
Activity statusHow available the issue appears right now: fresh, active, stale, blocked, or waiting on maintainer input.
Active
ClarityHow clearly the issue explains the expected change, acceptance criteria, and next step.
Clear
Prerequisites
Git
Newbie friendlinessA 1-100 score estimating how approachable this issue is for first-time contributors.
95